Knowledge Provenance

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Lead Professor: Deborah L. McGuinness

Meetings: Provenance Meetings

Description:

Knowledge Provenance
MetPetDB LogoA Database for Metamorphic Petrology (MetPetDB)
Principal Investigator: Frank Spear
Co Investigator: Peter Fox and Boleslaw K. Szymanski
Description: MetPetDB is a database for metamorphic petrology that is being designed and built by a global community of metamorphic petrologists in collaboration with computer scientists at Rensselaer Polytechnic Institute as part of the National Cyberinfrastructure Initiative and supported by the National Science Foundation.
AeroStat (AeroStat)
Principal Investigator: Greg Leptoukh
Co Investigator: Peter Fox, David Lary, Rob Levy, and Christopher Lynnes
Description: Objective Provide online environment for convenient access to: Satellite and ground-based aerosol data Quality information and provenance Calibration/validation data Provide multi-sensor services: Multi-sensor and model intercomparison Cross-sensor bias adjustment Data merging Create collaborative environment for aerosol researchers to share ideas, workflows and results
DQSS Project LogoCognitive Assistant that Learns and Organizes (CALO)
Principal Investigator: Deborah L. McGuinness
Description: The goal of the project CALO, for Cognitive Assistant that Learns and Organizes, is to create cognitive software systems, that is, systems that can reason, learn from experience, be told what to do, explain what they are doing, reflect on their experience, and respond robustly to surprise. Rensselaer is leading the explanation efforts.
DataONE Semantics LogoDataONE Semantics (D1-Semantics)
Principal Investigator: Deborah L. McGuinness
Co Investigator: Matt Jones, Ben Leinfelder, Xixi Luo, and Mark Schildhauer
Description: Semantic search on measurements will enable precise data discovery by helping users identify relevant content from the massive and heterogeneous catalog in DataONE, thereby improving efficiency and opportunities for researchers and other data consumers.
FUSE LogoForesight and Understanding from Scientific Exposition (FUSE)
Principal Investigator: Deborah L. McGuinness
Co Investigator: Jim Hendler
Description: Technical emergence refers to the process whereby innovative ideas, capabilities, applications, and even entirely new fields of study arise, are tested, mature, and, if conditions are favorable, demonstrate feasibility and impact. IARPA’s Foresight and Understanding from Scientific Exposition (FUSE) Program is sponsoring advanced research and development (R&D) to develop automated systems that aid in the systematic, continuous, and comprehensive assessment of technical emergence using information derived from the published scientific, technical, and patent literature.
Generalized Integrated Learning Architecture (GILA)
Principal Investigator: Jim Hendler and Deborah L. McGuinness
Description: The Generalized Integrated Learning Architecture [GILA] is a general-purpose integrated multi-agent platform that solves domain problems by learning from a problem-solution pair submitted by a human expert. One of the key purposes of GILA is to learn how humans solve complex problems and apply this knowledge to future problems. A complex problem domain known as the Airspace Control Scenario has been chosen to drive the development of GILA and evaluate its performance. The objective of this problem domain is to resolve conflicts in a collection of airspace allocations for aircrafts.
Global Change Information System: Information Model and Semantic Application Prototypes (GCIS-IMSAP)
Principal Investigator: Peter Fox
Description: The Tetherless World Constellation (TWC) at Rensselaer Polytechnic Institute (RPI) proposes to facilitate the vocabulary and ontology development within the context of the overall development of semantic prototypes for the National Climate Assessment (NCA) portals using a combination of environmental inter-agency collaborations in a use-case focused workshop setting, information modeling, and software developments and deployments. The prototypes are intended to provide search and browse options that inspire confidence that all relevant information has been found; data providers will be citable with detailed provenance generation. Expected deliverables are: information models, vocabulary and ontology services for vetted climate assessment settings, and search/ browse prototypes.
Health Data Challenge (HealthData)
Principal Investigator: Deborah L. McGuinness and Jim Hendler
Co Investigator: Kristine Gloria, Alvaro Graves, Tim Lebo, and James McCusker
Description: An infrastructure for large-scale collaboration around aggregation, generation, and publication of health-related Linked Data.
Health on the Web
Principal Investigator: Deborah L. McGuinness and Joanne S. Luciano
Description: The Tetherless World Constellation's Health on the Web's primary goal is to explore the next generation web technology needed to improve health.
Inference Web Project LogoInference Web
Principal Investigator: Deborah L. McGuinness
Description: The Inference Web is a Semantic Web based knowledge provenance infrastructure that supports interoperable explanations of sources, assumptions, learned information, and answers as an enabler for trust. Provenance - if users (humans and agents) are to use and integrate data from unknown, uncertain, or multiple sources, they need provenance metadata for evaluation Interoperability - more systems are using varied sources and multiple information manipulation engines, thus increasing interoperability requirements Explanation/Justification - if information has been manipulated (i.e., by sound deduction or by heuristic processes), information manipulation trace information should be available Trust - if some sources are more trustworthy than others, trust ratings are desired The Inference Web consists of two important components: Proof Markup Language (PML) Ontology - Semantic Web based representation for exchanging explanations including provenance information - annotating the sources of knowledge justification information - annotating the steps for deriving the conclusions or executing workflows trust information - annotating trustworthiness assertions about knowledge and sources IW Toolkit - Web-based and standalone tools that facilitate human users to browse, debug, explain, and abstract the knowledge encoded in PML.
Mobile Health Project LogoMobile Health
Principal Investigator: Deborah L. McGuinness
Description: The Mobile Health project aims to bring semantic representations of medical data collected from a variety of consumer and medical grade devices and integrate those data on an individual's mobile smartphone. Combined with the reasoning capabilities of semantic web and technologies such as IBM Watson, this project plans to enable personalized health care through the instrumented self.
PopSciGrid LogoPopulation Science Grid (PopSciGrid)
Principal Investigator: Deborah L. McGuinness
Description: The National Cancer Institute’s (NCI) PopSciGrid Community Health Portal is an evolving platform demonstrating how health behavior, policy, and demographic data can be integrated, visualized, and communicated to empower communities and support new avenues of research and policy for cancer prevention and control. As a proof of concept for cyber-enabled population health research, the PopSciGrid Portal is designed to encourage trans-disciplinary collaboration, data harmonization, and development of new computational methods for disparate health related data.
Repurposing Drugs with Semantics (ReDrugS)
Principal Investigator: Jonathan Dordick and Deborah L. McGuinness
Description: We aim to find new effective treatments for disease using existing drugs. Our approach is to gather and integrate existing data using semantic technologies to help discover promising drug repurposing.
SemantEco Annotator Project LogoSemantEco Annotator
Principal Investigator: Deborah L. McGuinness
Co Investigator: Patrice Seyed
Description: Generating useful RDF linked data is not a straightforward process for scientists using today's tools. In this project we introduce the SemantEco Annotator, a semantic web application that leverages community-based vocabularies and ontologies during the translation process itself to ease the process of drawing out implicit relationships in tabular data so that they may be immediately available for use within the LOD cloud. Our goal for the SemantEco Annotator is to make advanced RDF translation techniques available to the layperson.
SPCDIS Project LogoSemantic Provenance Capture in Data Ingest Systems (SPCDIS)
Principal Investigator: Peter Fox
Co Investigator: Deborah L. McGuinness
Description: The goal of this project is to develop at the RPI Tetherless World Constellation, based within the NCAR High Altitude Observatory and in collaboration with the University of Texas at El Paso, the University of Michigan and McGuinness Associates a semantically-enabled data ingest capability.
SemantAQUA LogoSemantic Water Quality Portal (SemantAQUA)
Principal Investigator: Deborah L. McGuinness
Co Investigator: Joanne S. Luciano
Description: We present a semantic technology-based approach to emerging environmental information systems. We used our linked data approach in the Tetherless World Constellation Semantic Water Quality Portal (TWC-SWQP). Our integration scheme uses a core domain ontology and integrates water data from different authoritative sources along with multiple regulation ontologies to enable pollution detection and monitoring. An OWL-based reasoning scheme identifies pollution events relative to user chosen regulations. Our approach also captures and leverages provenance to improve transparency. In addition, semantic water quality portal features provenance-based facet generation, query answering and data validation over the integrated data via SPARQL. We introduce the approach and the water portal, and highlight some of its potential impacts for the future of environmental monitoring systems.
TW Elixir: Web Interface for csv2rdf4lod Copnversion Automation (Elixir)
Principal Investigator: John S. Erickson
Co Investigator: Tim Lebo
Description: The goal of TW Elixir is to create an intuitive, interactive Web-based "front end" for the csv2rdf4lod conversion automation stack. Elixir will make it easy for users to create high-quality Linked Data. TW Elixir code will be made available to the community as open source.
HADATAC LogoThe Human-Aware Data Acquisition Framework (HADatAc)
Principal Investigator: Paulo Pinheiro
Co Investigator: Deborah L. McGuinness
Description:
Publications:
Santos, H., Dantas, V., Furtado, V., Pinheiro, P., and McGuinness, D.L. 2017. From Data to City Indicators: A Knowledge Graph for Supporting Automatic Generation of Dashboards. In Proceedings of European Semantic Web Conference - ESWC 2017 (May 28-June 1 2017, Portorož, Slovenia).
Erickson, J.S., McGuinness, D.L., Bennett, K., and Sheehan, J. 2016. Addressing Scientific Rigor in Data Analytics using Semantic Workflows. In Proceedings of International Provenance and Annotation Workshop (IPAW) 2016 (June 6-9 2016, McLean, Virginia).
Patton, E.W., Brown, E., Poegel, M., De Los Santos, H., Fasano, C.A., Bennett, K., and McGuinness, D.L. 2015. SemNExT: A Framework for Semantically Integrating and Exploring Numeric Analyses. In Proceedings of SemStats 2015 (October 11-12 2015, Bethlehem, PA).
McCusker, J. 2015. WebSig: A Digital Signature Framework for the Web.
Patton, E.W. and McGuinness, D.L. 2014. Toward Next Generation Integrative Semantic Health Information Assistants. In Proceedings of Expanding the Boundaries of Health Informatics using AI (HIAI14) (November 13-15 2014, Arlington, VA, USA), pages 39–46.
Patton, E.W. and McGuinness, D.L. 2014. Connecting Science Data Using Semantics and Information Extraction. In Proceedings of Linked Science 2014 at International Semantic Web Conference (ISWC) 2014 (October 19 2014, Riva del Garda, Trentino, Italy).
McCusker, J., Yan, R., Solanki, K., Erickson, J.S., Chang, C., Dumontier, M., Dordick, J., and McGuinness, D.L. 2014. A Nanopublication Framework for Biological Networks using Cytoscape.js. In Proceedings of International Conference on Biomedical Ontologies (ICBO 2014) (October 6-9 2014, Houston, TX).
Michaelis, J., McGuinness, D.L., Chang, C., Erickson, J.S., Hunter, D., and Babko-Malaya, O. 2014. Explaining Scientific and Technical Emergence Forecasting.
Ma, X., Fox, P., Tilmes, C., Jacobs, K., and Waple, A. 2014. Capturing provenance of global change information. Nature Climate Change
McCusker, J., Solanki, K., Chang, C., Dumontier, M., Dordick, J., and McGuinness, D.L. 2014. A Nanopublication Framework for Systems Biology and Drug Repurposing. In Proceedings of CSHALS 2014 (February 26-28 2014, Boston, MA).
Ma, X., Fox, P., Narock, T., and Wilson, B. 2013. Call for Papers: Semantic eScience special issue in Earth Science Informatics journal. Earth Science Informatics
Michaelis, J., McGuinness, D.L., Chang, C., Hunter, D., and Babko-Malaya, O. 2013. Towards Explanation of Scientific and Technological Emergence. In Proceedings of 2013 IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (August 25-28 2013, Niagara Falls, Canada).
Tilmes, C., Fox, P., Ma, X., McGuinness, D.L., Privette, A.P., Smith, A., Waple, A., Zednik, S., and Zheng, J. 2013. Provenance Representation for the National Climate Assessment in the Global Change Information System. IEEE Transactions on Geoscience and Remote Sensing
McCusker, J., Lebo, T., Krauthammer, M.O., and McGuinness, D.L. 2013. Next Generation Cancer Data Discovery, Access, and Integration Using Prizms and Nanopublications. In Proceedings of Ninth International Conference on Data Integration in the Life Sciences (July 11-12 2013, Montreal, Quebec).
Patton, E.W., Seyed, P., and McGuinness, D.L. 2013. SemantEco: A Modular Framework for Integration of Ecological, Environmental, and Earth Sciences Data.
McCusker, J., McGuinness, D.L., Lee, J., Thomas, C., Courtney, P., Tatalovich, Z., Contractor, N., Morgan, G.D., and Shaikh, A.R. 2013. Towards Next Generation Health Data Exploration: A Data Cube-based Investigation into Population Statistics for Tobacco. In Proceedings of Hawaii International Conference on System Sciences 2013 (January 7-10 2013, Grand Wailea, Maui, Hawaii).
Michaelis, J., McGuinness, D.L., Zednik, S., West, P., and Fox, P. 2012. Applying Semantics in Dataset Summarization for Solar Data Ingest Pipelines. In Proceedings of AGU Fall Meeting 2012 (December 3-7 2012, San Francisco, CA).
Michaelis, J., McGuinness, D.L., Chang, C., Luciano, J.S., McCusker, J., and Hendler, J. 2012. Applying Multidimensional Navigation and Explanation in Semantic Dataset Summarization. In Proceedings of ISWC 2012 (November 11-15 2012, Boston, MA).
Wang, P., Fu, L., Patton, E.W., McGuinness, D.L., Dein, J., and Bristol, S. 2012. Towards Semantically-enabled Exploration and Analysis of Environmental Ecosystems. In Proceedings of 8th IEEE International Conference on eScience (October 8-12 2012, Chicago, IL).
Zhangy, X., Shresthay, B., Yoon, S., Kambhampati, S., DiBona, P., Guo, J., McFarlane, D., Hofmann, M., Whitebread, K., Appling, D., Whitaker, E., Trewhitt, E., Ding, L., Michaelis, J., McGuinness, D.L., Hendler, J., Doppa, J., Parker, C., Dietterich, T., Tadepalli, P., Wong, W., Greenyy, D., Rebgunsyy, A., Spearsyy, D., Kuter, U., Levine, G., DeJong, G., MacTavish, R., Ontanon, S., Radhakrishnan, J., Ram, A., Mostafa, H., Zafar, H., Zhang, C., Corkill, D., Lesser, V., and Song, Z. 2012. An Ensemble Architecture for Learning Complex Problem-Solving Techniques from Demonstration. Transactions on Intelligent Systems and Technology
Lebo, T., Wang, P., Graves, A., and McGuinness, D.L. 2012. Towards Unified Provenance Granularities. In Proceedings of International Provenance and Annotation Workshop 2012 (June 18-22 2012, Santa Barbara, California).
Wang, P., Fu, L., Patton, E.W., McGuinness, D.L., Dein, J., and Bristol, S. 2012. SemantEco Extension for Natural Resource Managers.
Wang, P. 2012. Semantically Enabling Next Generation Environmental Informatics Portals.
McCusker, J., Lebo, T., Graves, A., DiFranzo, D., Pinheiro, P., and McGuinness, D.L. 2012. Functional Requirements for Information Resource Provenance on the Web. In Proceedings of International Provenance and Annotation Workshop 2012 (June 18-22 2012, Santa Barbara, California).
McCusker, J., Lebo, T., Chang, C., Pinheiro, P., and McGuinness, D.L. 2012. Parallel Identities for Managing Open Government Data. IEEE Intelligent Systems
Lebo, T., Erickson, J.S., Ding, L., Graves, A., Williams, G.T., DiFranzo, D., Li, X., Michaelis, J., Zheng, J., Flores, J., Shangguan, Z., McGuinness, D.L., and Hendler, J. Producing and Using Linked Open Government Data in the TWC LOGD Portal. In Linking Government Data, pages 51–72. New York, 2011. 10.1007/978-1-4614-1767-5_3
2011. Linking Government Data.
Wang, P., Zheng, J., Fu, L., Patton, E.W., Lebo, T., Ding, L., Luciano, J.S., and McGuinness, D.L. 2011. Next Generation Environmental Informatics as exemplified by the Tetherless World Semantic Water Quality Portal. In Proceedings of AGU Fall Meeting 2011 (December 5-9 2011).
Zhangy, X., Yoon, S., DiBona, P., Appling, D., Ding, L., Doppa, J., Greenyy, D., Guo, J., Kuter, U., Levine, G., MacTavish, R., McFarlane, D., Michaelis, J., Mostafa, H., Ontanon, S., Parker, C., Radhakrishnan, J., Rebgunsyy, A., Shresthay, B., Song, Z., Trewhitt, E., Zafar, H., Zhang, C., Corkill, D., DeJong, G., Dietterich, T., Kambhampati, S., Lesser, V., McGuinness, D.L., Ram, A., Spearsyy, D., Tadepalli, P., Whitaker, E., Wong, W., Hendler, J., Hofmann, M., and Whitebread, K. 2011. An Ensemble Learning and Problem Solving Architecture for Airspace Management. Transactions on Intelligent Systems and Technology
Lebo, T., Erickson, J.S., Graves, A., Williams, G.T., DiFranzo, D., Li, X., Michaelis, J., Zheng, J., Flores, J., Shangguan, Z., McGuinness, D.L., and Hendler, J. 2011. Producing and Using Linked Open Government Data in the TWC LOGD Portal. In Proceedings of AAAI Fall Symposium on Open Government Knowledge: AI Opportunities and Challenges 2011 (November 4-7 2011, Arlington VA).
Patton, E.W., Wang, P., Zheng, J., Fu, L., Lebo, T., Ding, L., Liu, Q., Luciano, J.S., and McGuinness, D.L. 2011. Assessing Health Effects of Water Pollution Using a Semantic Water Quality Portal. In Proceedings of 10th International Semantic Web Conference (October 23-27 2011, Bonn, Germany).
McCusker, J., Lebo, T., Ding, L., Chang, C., Pinheiro, P., and McGuinness, D.L. 2011. Where did you hear that? Information and the Sources They Come From. In Proceedings of International Workshop on Linked Science 2011 (October 14 2011, Bonn, Germany).
Wang, P., Zheng, J., Fu, L., Patton, E.W., Lebo, T., Ding, L., Liu, Q., Luciano, J.S., and McGuinness, D.L. 2011. A Semantic Portal for Next Generation Monitoring Systems. In Proceedings of 10th International Semantic Web Conference (October 23-27 2011, Bonn, Germany).
Zheng, J., Wang, P., Patton, E.W., Lebo, T., Luciano, J.S., and McGuinness, D.L. 2011. A Semantically-Enabled Provenance-Aware Water Quality Portal. In Proceedings of the Environmental Information Management Conference 2011 (September 28-29 2011, Santa Barbara, CA, USA).
Fox, P. 2011. The rise of informatics as a research domain.
Sutcliffe, G., Chang, C., McGuinness, D.L., Lebo, T., Ding, L., and Pinheiro, P. 2011. Combining Proofs to form Different Proofs. In Proceedings of PxTP-2011 First Workshop on Proof eXchange for Theorem Proving at CADE – the 23rd International Conference on Automated Deduction (August 1 2011).
Wang, P., Zheng, J., Fu, L., Patton, E.W., Lebo, T., Ding, L., Liu, Q., Luciano, J.S., and McGuinness, D.L. 2011. TWC-SWQP: A Semantic Portal for Next Generation Environmental Monitoring (Technical Report).
Ding, L., Lebo, T., Erickson, J.S., DiFranzo, D., Williams, G.T., Li, X., Michaelis, J., Graves, A., Zheng, J., Shangguan, Z., Flores, J., McGuinness, D.L., and Hendler, J. 2011. TWC LOGD: A Portal for Linked Open Government Data Ecosystems. Journal of Web Semantics, pages 1–11.
McGuinness, D.L., Shaikh, A.R., Moser, R., Hesse, B.W., Morgan, G.D., Jacobs, M., Hunt, Y., Tatalovich, Z., Willis, G., Blake, K., Courtney, P., Finney, L., Sanders, A., Ding, L., Lebo, T., McCusker, J., Contractor, N., Huang, Y., and Devlin, H. 2011. A Semantically-enabled Community Health Portal for Cancer Prevention and Control. In Proceedings of Web Science Conference 2011 (June 15-17 2011, Koblenz, Germany).
Ding, L., Michaelis, J., McCusker, J., and McGuinness, D.L. 2011. Linked provenance data: A semantic Web-based approach to interoperable workflow traces. Future Generation Computer Systems, pages 797–805.
Zednik, S., Fox, P., and McGuinness, D.L. System Transparency, or How I Learned to Worry about Meaning and Love Provenance!. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US), pages 165–173. 2010.
West, P., Michaelis, J., Fox, P., Zednik, S., and McGuinness, D.L. 2010. Presenting Provenance Based on User Roles: Experiences with a Solar Physics Data Ingest System. In Proceedings of AGU Fall Meeting 2010 (December 13-17 2010, San Francisco, CA).
Michaelis, J., Moreau, L., McGuinness, D.L., McGuinness, D.L., Michaelis, J., and Moreau, L. 2010. Provenance and Annotation of Data and Processes. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Halpin, H., Hayes, P.J., McCusker, J., McGuinness, D.L., and Thompson, H.S. 2010. When owl:sameAs isn’t the Same: An Analysis of Identity in Linked Data. In Proceedings of ISWC 2010 (November 7-11 2010, Shanghai, China).
Tao, J. 2010. Adding Integrity Constraints to the Semantic Web for Instance Data Evaluation. In Proceedings of ISWC 2010 (November 7-11 2010, Shanghai, China).
Ding, L., Shinavier, J., Shangguan, Z., and McGuinness, D.L. 2010. SameAs Networks and Beyond: Analyzing Deployment Status and Implications of owl:sameAs in Linked Data. In Proceedings of ISWC 2010 (November 7-11 2010, Shanghai, China).
Michaelis, J. and McGuinness, D.L. 2010. Towards Provenance Aware Comment Tracking for Web Applications. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Bao, J., Ding, L., and McGuinness, D.L. 2010. Semantic History: Towards Modeling and Publishing Changes of Online Semantic Data. In Proceedings of 2nd Annual Social Data on the Web Workshop (October 25 2009, Washington, DC).
Sutcliffe, G., Chang, C., Ding, L., McGuinness, D.L., and Pinheiro, P. 2010. Different Proofs are Good Proofs. In Proceedings of EMS+QMS 2010 at IJCAR 2010 (July 20 2010, Edinburgh, UK).
Tao, J., Sirin, E., Bao, J., and McGuinness, D.L. 2010. Integrity Constraints in OWL. In Proceedings of AAAI 2010 (July 11-15 2010).
Graves, A. 2010. POMELo: A PML Online Editor. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Shangguan, Z., Zheng, J., and McGuinness, D.L. 2010. Provenance-aware Faceted Search in Drupal. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
McCusker, J. and McGuinness, D.L. 2010. Provenance of High Throughput Biomedical Experiments. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Patton, E.W., DiFranzo, D., and McGuinness, D.L. 2010. SAF: A Provenance-tracking Framework for Interoperable Semantic Applications. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Tao, J., Sirin, E., Bao, J., and McGuinness, D.L. 2010. Integrity Constraints in OWL.
Ding, L., Bao, J., Michaelis, J., Zhao, J., and McGuinness, D.L. 2010. Reflections on Provenance Ontology Encodings. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US).
Tao, J., Sirin, E., Bao, J., and McGuinness, D.L. 2010. Extending OWL with Integrity Constraints. In Proceedings of Description Logics Workshop 2010 (May 4-7 2010, Waterloo, Canada).
Ding, L., Shinavier, J., Finin, T.W., and McGuinness, D.L. 2010. owl:sameAs and Linked Data: An Empirical Study. In Proceedings of Web Science Conference 2010 (April 26-27 2010, Raleigh, North Carolina).
Ding, L., Michaelis, J., McGuinness, D.L., and Hendler, J. 2010. Making Sense of Open Government Data. In Proceedings of Web Science Conference 2010 (April 26-27 2010, Raleigh, North Carolina).
Ding, L., DiFranzo, D., Graves, A., Michaelis, J., Li, X., McGuinness, D.L., and Hendler, J. 2010. Data-govWiki: Towards Linking Government Data. In Proceedings of AAAI 2010 Spring Symposium at AAAI 2010 (March 22-24 2010March 22-24 2010March 22-24 2010March 22-24 2010, Palo Alto, California, USPalo Alto, California, USPalo Alto, California, USPalo Alto, California, US).
Lebo, T. and McGuinness, D.L. 2010. Creating, Interpreting, and Repurposing Visual Messages.
Li, X., Lebo, T., and McGuinness, D.L. 2010. Provenance-Based Strategies to Develop Trust in Semantic Web Applications. In Proceedings of International Provenance and Annotation Workshop 2010 (June 15-16 2010, Hefner Alumni House, Rensselaer Polytechnic Institute, Troy, NY, US), pages 182–197.
Waterman, K.K., McGuinness, D.L., and Ding, L. 2010. Selective Privacy in a Web-based World: Challenges of Representing and Inferring Context. In Proceedings of Intelligent Information Privacy Management (March 23-25 2010).
Tao, J., Tao, J., Sirin, E., and Sirin, E. 20092009. Integrity Constraints in OWL. In Proceedings of ISWC 2009, International Semantic Web Conference (October 25-29 2009, Chantilly, VA, US).
Michaelis, J., Ding, L., Shangguan, Z., Zednik, S., Huang, R., Pinheiro, P., Rio, N., and McGuinness, D.L. 2009. Towards Usable and Interoperable Workflow Provenance: Empirical Case Studies Using PML. In Proceedings of First International Workshop on the role of Semantic Web in Provenance Management (October 25 2009).
Zednik, S., Fox, P., McGuinness, D.L., Pinheiro, P., and Chang, C. 2009. Semantic Provenance for Science Data Products - Application to Image Data Processing. In Proceedings of First International Workshop on the role of Semantic Web in Provenance Management (October 25 2009).
Michaelis, J., Zednik, S., Ding, L., and McGuinness, D.L. 2009. A Comparison of the OPM and PML Provenance Models.
Sirin, E. and Tao, J. 2009. Towards Integrity Constraints in OWL. In Proceedings of OWLED 2009 (October 23-24 2009, Westfields Conference Center, Washington, D.C., US).
Tao, J., Ding, L., Bao, J., and McGuinness, D.L. 2009. Instance Data Evaluation for Semantic Web-Based Knowledge Management Systems. In Proceedings of 42nd Hawaii International Conference on Systems Science (January 5-8 2009).
Zhangy, X., Yoon, S., DiBona, P., Appling, D., Ding, L., Doppa, J., Greenyy, D., Guo, J., Kuter, U., Levine, G., MacTavish, R., McFarlane, D., Michaelis, J., Mostafa, H., Ontanon, S., Parker, C., Radhakrishnan, J., Rebgunsyy, A., Shresthay, B., Song, Z., Trewhitt, E., Zafar, H., Zhang, C., Corkill, D., DeJong, G., Dietterich, T., Kambhampati, S., Lesser, V., McGuinness, D.L., Ram, A., Spearsyy, D., Tadepalli, P., Whitaker, E., Wong, W., Hendler, J., Hofmann, M., and Whitebread, K. 2009. An Ensemble Learning and Problem Solving Architecture for Airspace Management. In Proceedings of Twenty-First Innovative Applications of Artificial Intelligence Conference (July 14-16 2009).
Michaelis, J., Ding, L., and McGuinness, D.L. 2009. Towards the Explanation of Workflows. In Proceedings of Workshop on Explanation-Aware Computing 2009 (July 11-13 2009, Pasadena, CA, US).
McGuinness, D.L. 2008. Information Fusion: Moving from domain independent to domain literate approaches. In Proceedings of AGU Fall Meeting 2008 (December 15-19 2008, San Francisco, CA).
McGuinness, D.L., Fox, P., Pinheiro, P., Zednik, S., Rio, N., Ding, L., West, P., and Chang, C. 2008. Annotating and embedding provenance in science data repositories to enable next generation science applications. In Proceedings of AGU Fall Meeting 2008 (December 15-19 2008, San Francisco, CA).
Tao, J., Ding, L., Bao, J., and McGuinness, D.L. 2008. Characterizing and Detecting Integrity Issues in OWL Instance Data. In Proceedings of OWLED EU 2008 (October 26-27 2008, Karlsruhe, Germany).
Michaelis, J., Ding, L., and McGuinness, D.L. 2008. The TW Wine Agent: A Social Semantic Web Demo. In Proceedings of ISWC 2008 (October 26-30 2008, Karlsruhe, Germany).
Pinheiro, P., Sutcliffe, G., Chang, C., Ding, L., Rio, N., and McGuinness, D.L. 2008. Presenting TSTP Proofs with Inference Web Tools. In Proceedings of Workshop on Practical Aspects of Automated Reasoning (August 10-11 2008).
Glass, A., McGuinness, D.L., Pinheiro, P., and Wolverton, M. 2008. Trustable Task Processing Systems.
Fox, P., McGuinness, D.L., Garcia, J., Zednik, S., and Ding, L. 2008. Semantic Provenance for Image Data Processing. In Proceedings of Geoinformatics 2008 (June 11-13 2008).
Ding, L., Tao, J., and McGuinness, D.L. 2008. An Initial Investigation on Evaluating Semantic Web Instance Data. In Proceedings of WWW 2008 (April 21-25 2008, Beijing, China), pages 1179–1180.
Ding, L., Tao, J., and McGuinness, D.L. 2008. OWL Instance Data Evaluation. In Proceedings of OWLED DC 2008 (April 1-2 2008, Washington, D.C.).
McGuinness, D.L. and Pinheiro, P. 2007. PML 2: A Modular Explanation Interlingua. In Proceedings of Workshop on Explanation-aware Computing 2007 (July 22-23 2007, Vancouver, British Columbia, Canada).
Ding, L. 2007. Provenance and Search Issues in RDF Data Warehouse. In Proceedings of SemGrail2007 (June 21-22 2007, Redmond, WA).
McGuinness, D.L., Ding, L., Glass, A., Chang, C., Zeng, H., and Furtado, V. 2006. Explanation Interfaces for the Semantic Web: Issues and Models. In Proceedings of 3rd International Semantic Web User Interaction Workshop (November 6 2006).
Zeng, H., Alhossaini, M., Ding, L., Fikes, R., and McGuinness, D.L. 2006. Computing trust from revision history. In Proceedings of PST 2006 (October 30-November 1 2006October 30-November 1 2006, Markham, Ontario, CanadMarkham, Ontario, Canada).
Zeng, H., Alhossaini, M., Ding, L., Fikes, R., and McGuinness, D.L. 2006. Computing Trust from Revision History. In Proceedings of PST 2006 (October 30-November 1 2006, Markham, Ontario, Canada).
Pinheiro, P., McGuinness, D.L., and Fikes, R. 2006. A Proof Markup Language for Semantic Web Services. Information Systems, pages 381–395.
Ding, L., Finin, T.W., Peng, Y., Pinheiro, P., and McGuinness, D.L. 2005. Tracking RDF Graph Provenance using RDF Molecules. In Proceedings of ISWC 2005 (November 6-10 2005, Galway, Ireland).
McGuinness, D.L. and Pinheiro, P. 2004. Explaining Answers from the Semantic Web: The Inference Web Approach. Journal of Web Semantics, pages 397–413.
Pinheiro, P., McGuinness, D.L., and McCool, R. 2004. Knowledge Provenance Infrastructure.

Presentations:
Ma, X., Erickson, J., West, P., Zednik, S., & Fox, P. (December 17, 2015). Semantic Specification of Data Type Information in the Deep Carbon Observatory Data Portal. In: AGU Fall meeting 2015
Fox, P., & Fox, P. (September 25, 2015September 25, 2015). RDA and Metadata. In: RDA Sixth Plenary Meeting
Ma, X., Erickson, J., West, P., Zednik, S., & Fox, P. (September 23, 2015). Adoption* of RDA DTR and PIT in the Deep Carbon Observatory Data Portal. In: RDA Sixth Plenary Meeting
West, P., Michaelis, J., Lebo, T., McGuinness, D., & Fox, P. (December 17, 2014). Citation and Recognition of contributions using Semantic Provenance Knowledge Captured in the OPeNDAP Software Framework. In: AGU Fall Meeting 2014
Fu, L., Ma, X., West, P., Beaulieu, S., Di Stefano , M., & Fox, P. (December 17, 2014). Towards a common provenance model for research publications. In: AGU Fall Meeting 2014
Patton, E., Sheehan, J., Liu, Y., Makni, B., & McGuinness, D. (November 5, 2014). Towards Next Generation Integrative Mobile Semantic Health Information Assistants. In: Medical Device Day 2014
Kinkead, L. (October 27, 2014). Intelligent Deployment of Sensor Networks Proposal. In: Jefferson Project F2F Semantics Meeting (October 27, 2014)
Fox, P. (September 17, 2014). Toward verifiable science assessment reporting: The Global Change Information System (GCIS).
McCusker, J., Yan, R., Solanki, K., Erickson, J., Chang, C., Dumontier, M., Dordick, J., & McGuinness, D. (September 15, 2014). A Nanopublication Framework for Biological Networks using Cytoscape.js. In: International Conference on Biomedical Ontologies (ICBO 2014)
Fox, P., Erickson, J., West, P., Ma, X., Zednik, S., Hendler, J., Chen, Y., & Wang, H. (August 7, 2014). Implementation of Open-World, Integrative, Transparent, Collaborative Science Data Platforms. In: VIVO 2014
Pinheiro, P. (July 15, 2014). HASNetO: A Human-Aware Sensor Network Ontology. In: TW E-Science Group Meeting
Di Stefano , M., Fu, L., West, P., Ma, X., Beaulieu, S., & Fox, P. (July 9, 2014). Development of cyberinfrastructure to facilitate collaboration and knowledge sharing for marine Integrated Ecosystem Assessments. In: ESIP Summer Meeting 2014
West, P., Michaelis, J., Lebo, T., & McGuinness, D. (July 8, 2014). Applying Provenance Extensions to OPeNDAP Framework. In: OPeNDAP Developer's Meeting 2014 at ESIP Summer Meeting 2014
Michaelis, J., West, P., Lebo, T., & McGuinness, D. (July 6, 2014). Applying Provenance Extensions to the OPeNDAP Framework. In: ESIP Summer Meeting 2014DataONE User Group Meeting 2014 at ESIP Summer Meeting 2014OPeNDAP Developer's Meeting 2014 at ESIP Summer Meeting 2014
Fox, P. (June 24, 2014). Facilitating Next Generation Science Collaboration: Marine Ecosystems Status Reports and Assessments. In: IMBER Open Science Conference
Fox, P. (June 23, 2014). Informatics approaches as basis for integrating science and governance across scales in complex networks of large marine ecosystems.. In: IMBER Open Science Conference
Pinheiro, P., & McGuinness, D. (June 9, 2014). Extended Semantic Infrastructure for Jefferson Project. In: Jefferson Project Team Meeting - June 2014
Fu, L., Ma, X., Zheng, J., Goldstein, J., Duggan, B., West, P., Aulenbach, S., Tilmes, C., & Fox, P. (April 27, 2014). Ontology Development for Provenance Tracing in National Climate Assessment of the US Global Change Research Program. In: European Geosciences Union General Assembly 2014
Fox, P. (April 16, 2014). Toward verifiable science: iPython meets PROV-O.
McCusker, J., Solanki, K., Chang, C., Dumontier, M., Dordick, J., & McGuinness, D. (February 26, 2014). A Nanopublication Framework for Systems Biology and Drug Repurposing. In: CSHALS 2014
West, P. (February 12, 2014). Coding Provenance in Software and Matching Tools to Data. In: TWeD Discussion: Coding Provenance in Software and Matching Tools to Data
West, P., Erickson, J., Ma, X., & Fox, P. (January 23, 2014). Deep Carbon Observatory: Data Science and Data Management Infrastructure Overview and Demonstration. In: VIVO Developers Conference Call, Thursday, January 23, 2014
West, P., Erickson, J., Fox, P., & Ma, X. (January 22, 2014). Deep Carbon Observatory: Data Science and Data Management Infrastructure Overview and Demonstration. In: Boulder Earth and Space Science Informatics Group Meeting January 22 2014
West, P., Hoebelheinrich, N., Lynnes, C., & Fox, P. (January 8, 2014). ToolMatch: Discovering What Tools can be used to Access, Manipulate, Transform, and Visualize Data. In: ESIP Winter Meeting 2014
Beaulieu, S., Maffei, A., Fox, P., West, P., Di Stefano , M., Hare, J., & Fogarty, M. (December 13, 2013). Provenance for actionable data products and indicators in marine ecosystem assessments. In: AGU Fall Meeting 2013
Fox, P. (July 17, 2013). An Open-World Iterative Methodology for the Development and Evaluation of Semantically-Enabled Applications. In: AAAI/IAAI 2013
Ma, X., Zheng, J., Goldstein, J., Fu, L., Aulenbach, S., Tilmes, C., & Fox, P. (July 11, 2013). A use case-driven iterative method for building a provenance-aware GCIS ontology.
Tilmes, C., Duggan, B., Aulenbach, S., Goldstein, J., Buddenberg, A., Fox, P., Ma, X., Zheng, J., & Fu, L. (July 11, 2013). Global Change Information System. In: ESIP Federation Summer Meeting 2013
Goldstein, J., Ma, X., Zheng, J., David, R., Tilmes, C., Privette, A., Aulenbach, S., McVey, M., & Fox, P. (April 4, 2013). Provenance of Figures in the Global Change Information System. In:
Zednik, S., Michaelis, J., & Fox, P. (April 1, 2013). Integrating provenance into an operational data product information system. In: International Provenance and Annotation Workshop 2012
Fox, P., Tilmes, C., Ma, X., & Zheng, J. (March 14, 2013). Global Change Information System: Traceable Accounts and Provenance.
Wang, H., Chen, Y., Ma, X., Erickson, J., West, P., & Fox, P. (March 3, 2013). Research Initiatives in Deep Carbon Observatory – Data Science. In: DCO International Science Meeting
Ma, X., Chen, Y., Wang, H., West, P., Erickson, J., & Fox, P. (March 3, 2013). Data Management Plans for the Deep Carbon Observatory: What, Why and How?. In: DCO International Science Meeting
Zheng, J., Tilmes, C., Zednik, S., Ma, X., & Fox, P. (December 7, 2012). Modeling and Representing National Climate Assessment Information using Linked Data. In: AGU Fall Meeting 2012
Zednik, S., Fox, P., & McGuinness, D. (December 7, 2012). A Mark-up Language for Solar Terrestrial Observations and Measurements. In: AGU Fall Meeting 2012
Di Stefano , M., Fox, P., Beaulieu, S., Maffei, A., West, P., & Hare, J. (December 7, 2012). Enabling the Integrated Assessment of Large Marine Ecosystems: Informatics to the Forefront of Science-Based Decision Support. In: AGU Fall Meeting 2012
Zednik, S., Michaelis, J., & Fox, P. (June 20, 2012). Integrating Provenance into an operational Data Product Information System. In: International Provenance and Annotation Workshop 2012
Fox, P. (June 14, 2012). The Role of Virtual Observatories and Data Frameworks in an Era of Big Data.. In: NIST Big Data 2012
Lynnes, C., Olsen, E., Fox, P., Vollmer, B., & Wolfe, R. (March 9, 2012). A Data Quality Screening Service for Remote Sensing Data - Annual Review 2012.
Fox, P. (August 2, 2011). The rise of informatics as a research domain. In: WIRADA Science Symposium 2011
Wang, P., Zheng, J., Fu, L., Patton, E., Lebo, T., Ding, L., Luciano, J., & McGuinness, D. (July 25, 2011). TWC-SWQP: A Semantically-Enabled Provenance-Aware Water Quality Portal .
Leptoukh, G., Lynnes, C., Fox, P., Ahmad, S., Pan, J., Zednik, S., & West, P. (June 23, 2011). Addressing and Presenting Quality of Satellite Data via Web-based Services. In: Earth Science Technology Forum 2011
Lebo, T. (April 8, 2011). A Methodological Approach to Incorporating Data-On-The-Web: Sociological and Psychological Considerations.
Zednik, S., Leptoukh, G., Fox, P., Lynnes, C., & Pan, J. (April 8, 2011). Experiences Developing a User-centric Presentation of Provenance for a Web-based Science Data Analysis Tool. In: EGU General Assembly 2011
Lebo, T. (March 23, 2011). A Methodological Approach to Incorporating Data-On-The-Web: Sociological and Psychological Considerations. In:
McGuinness, D. (March 18, 2011). Linked Data and the Provenance Explosion. In: Second International Colloquium on Data Provenance and Data Management for eScience (DPDM'11)
West, P., Michaelis, J., Fox, P., Zednik, S., & McGuinness, D. (December 17, 2010). Presenting Provenance Based on User Roles: Experiences with a Solar Physics Data Ingest System. In: AGU Fall Meeting 2010
Michaelis, J., Zednik, S., West, P., Fox, P., & McGuinness, D. (December 16, 2010). Extending eScience Provenance with User-Submitted Semantic Annotations, Abstract IN43C-08. In: AGU Fall Meeting 2010
Zednik, S., Lynnes, C., Fox, P., Leptoukh, G., & Pan, J. (December 13, 2010). A Semantic Provenance-aware Expert Advisory System in a Web-based Science Data Analysis Tool. In: AGU Fall Meeting 2010
Chang, C., Zednik, S., Lynnes, C., Fox, P., McGuinness, D., Leptoukh, G., & Pan, J. (December 13, 2010). Experiences Developing A User-centric Presentation of A Domain-enhanced Provenance Data Model. In: AGU Fall Meeting 2010
Michaelis, J., Zednik, S., West, P., Fox, P., & McGuinness, D. (December 1, 2010). Extending eScience Provenance with User-Submitted Semantic Annotations. In: AGU Fall Meeting 2010
Lebo, T. (October 8, 2010). Developing Trust in Aggregated Government Data: Provenance, Interpretation Knowledge and URI Design for Incremental Enhancement of Tabular Data.
Patton, E., DiFranzo, D., & McGuinness, D. (June 24, 2010). SAF: A Provenance-tracking Framework for Interoperable Semantic Applications. In: International Provenance and Annotation Workshop 2010
Fox, P., & McGuinness, D. (December 18, 2009). The Semantic e-Science Framework. In: AGU Fall Meeting 2009
Ding, L., Bao, J., & McGuinness, D. (December 19, 2008). Knowledge Provenance in Semantic Wikis. In: AGU Fall Meeting 2008
McGuinness, D., Fox, P., Pinheiro, P., Zednik, S., Rio, N., Ding, L., West, P., & Chang, C. (December 15, 2008). Annotating and embedding provenance in science data repositories to enable next generation science applications. In: AGU Fall Meeting 2008
Fox, P., McGuinness, D., Garcia, J., Zednik, S., & Ding, L. (June 11, 2008). Semantic Provenance for Image Data Processing. In: Geoinformatics 2008